Computational analyses of next-generation sequencing data obtained on Illumina, BGI/MGI or Ion Torrent platforms. Our bioinformatics support can be fully customized for your research needs, the scope and the objectives of the study. We apply only up-to-date well-proven software and pipelines working under Unix/Linux environment. Optionally, our experts can help to interpret the obtained results from the scientific point of view, provided some of them are working in a close research field. Below you could find the default workflows which we offer for the corresponding type of NGS data. The raw sequencing data is accepted in the forms of BCL, FASTQ or BAM files which are typically uploaded into the common web-cloud repositories. Alternatively, the data can be sent to our office on a hard drive or USB stick.
NGS service providers usually deliver unprocessed FASTQ files containing raw reads. Before performing the actual analysis of DNA-seq or RNA-seq data, the raw reads within have to be trimmed from contaminating adapter sequences, aligned to a proper reference genome or transcriptome, quantified and, finally, converted into VCF tables or count matrices. The latter files can be directly imported and analyzed in e.g. Excel or R/Bioconductor software.
Both packages include delivery of standard FASTQC reports, tables with mapping statistics and the exact scripts used for data processing.
You could first send us a short project description by email or using the contact form below. Upon evaluating your request with we will offer an initial free-of-charge consultation to discuss the details of the project including the deliverables and the price. Alternatively, you could call us directly at +49 171 1908276 to discuss your project details and the terms of the contract.